CT-RATE
Models read 3D non-contrast chest CT volumes and say whether each of 18 conditions is present. Scored by macro accuracy or F1 against report-derived labels.
The dataset has 25,692 chest CT scans from 21,304 patients with their reports. MedGemma 1.5 uses 1,558 validation volumes as an out-of-distribution test.
- Made by
- University of Zurich and collaborators (Hamamci et al.)
- Released
- March 2024
- Kind
- Medicine
- Level
- Expert
- Scored
- Checked automatically
- Answers
- Short answer
- Tasks
- All public
In the authors’ words
Advancements in medical imaging AI, particularly in 3D imaging, have been limited due to the scarcity of comprehensive datasets. We introduce CT-RATE, a public dataset that pairs 3D medical images with corresponding textual reports. CT-RATE comprises 25,692 non-contrast 3D chest CT scans from 21,304 unique patients. Each scan is accompanied by its corresponding radiology report. Leveraging CT-RATE, we develop CT-CLIP, a CT-focused contrastive language-image pretraining framework designed for broad applications without the need for task-specific training. We demonstrate how CT-CLIP can be used in multi-abnormality detection and case retrieval, and outperforms state-of-the-art fully supervised models across all key metrics. By combining CT-CLIP's vision encoder with a pretrained large language model, we create CT-CHAT, a vision-language foundational chat model for 3D chest CT volumes. Finetuned on over 2.7 million question-answer pairs derived from the CT-RATE dataset, CT-CHAT underscores the necessity for specialized methods in 3D medical imaging. Collectively, the open-source release of CT-RATE, CT-CLIP, and CT-CHAT not only addresses critical challenges in 3D medical imaging but also lays the groundwork for future innovations in medical AI and improved patient care.
No scores here yet
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